Novel quantitative trait loci for partial resistance to Phytophthora sojae in soybean PI 398841.
Identifieur interne : 001262 ( Main/Exploration ); précédent : 001261; suivant : 001263Novel quantitative trait loci for partial resistance to Phytophthora sojae in soybean PI 398841.
Auteurs : Sungwoo Lee [États-Unis] ; M A Rouf Mian ; Leah K. Mchale ; Hehe Wang ; Asela J. Wijeratne ; Clay H. Sneller ; Anne E. DorranceSource :
- TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [ 1432-2242 ] ; 2013.
Descripteurs français
- KwdFr :
- Cartographie chromosomique (MeSH), Croisements génétiques (MeSH), Génotype (MeSH), Locus de caractère quantitatif (génétique), Lod score (MeSH), Maladies des plantes (microbiologie), Phytophthora (pathogénicité), Phénotype (MeSH), Résistance à la maladie (génétique), Soja (génétique), Épistasie (génétique).
- MESH :
- génétique : Locus de caractère quantitatif, Résistance à la maladie, Soja, Épistasie.
- microbiologie : Maladies des plantes.
- pathogénicité : Phytophthora.
- Cartographie chromosomique, Croisements génétiques, Génotype, Lod score, Phénotype.
English descriptors
- KwdEn :
- MESH :
- genetics : Disease Resistance, Epistasis, Genetic, Quantitative Trait Loci, Soybeans.
- microbiology : Plant Diseases.
- pathogenicity : Phytophthora.
- Chromosome Mapping, Crosses, Genetic, Genotype, Lod Score, Phenotype.
Abstract
Phytophthora root and stem rot caused by Phytophthora sojae Kaufmann and Gerdemann is one of the most severe soybean [Glycine max (L.) Merr] diseases in the USA. Partial resistance is as effective in managing this disease as single-gene (Rps gene)-mediated resistance and is more durable. The objective of this study was to identify quantitative trait loci (QTL) associated with partial resistance to P. sojae in PI 398841, which originated from South Korea. A population of 305 F7:8 recombinant inbred lines derived from a cross of OX20-8 × PI 398841 was used to evaluate partial resistance against P. sojae isolate C2S1 using a tray test. Composite interval mapping using a genome-wide logarithm of odd (LOD) threshold detected three QTL on chromosomes 1, 13, and 18, which individually explained 4-16 % of the phenotypic variance. Seven additional QTL, accounting for 2-3 % of phenotypic variance each, were identified using chromosome-wide LOD thresholds. Seven of the ten QTL for resistance to P. sojae were contributed by PI 398841. Seven QTL co-localized with known Rps genes and previously reported QTL for soil-borne root pathogens, isoflavone, and seed oil. Three QTL on chromosomes 3, 13, and 18 co-localized with known Rps genes, but PI 398841 did not exhibit an Rps gene-mediated resistance response following inoculation with 48 different isolates of P. sojae. PI 398841 is potentially a source of novel genes for improving soybean cultivars for partial resistance to P. sojae.
DOI: 10.1007/s00122-013-2040-x
PubMed: 23354974
PubMed Central: PMC3607739
Affiliations:
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Mchale</name></author><author><name sortKey="Wang, Hehe" sort="Wang, Hehe" uniqKey="Wang H" first="Hehe" last="Wang">Hehe Wang</name></author><author><name sortKey="Wijeratne, Asela J" sort="Wijeratne, Asela J" uniqKey="Wijeratne A" first="Asela J" last="Wijeratne">Asela J. Wijeratne</name></author><author><name sortKey="Sneller, Clay H" sort="Sneller, Clay H" uniqKey="Sneller C" first="Clay H" last="Sneller">Clay H. Sneller</name></author><author><name sortKey="Dorrance, Anne E" sort="Dorrance, Anne E" uniqKey="Dorrance A" first="Anne E" last="Dorrance">Anne E. Dorrance</name></author></analytic><series><title level="j">TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</title><idno type="eISSN">1432-2242</idno><imprint><date when="2013" type="published">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Chromosome Mapping (MeSH)</term><term>Crosses, Genetic (MeSH)</term><term>Disease Resistance (genetics)</term><term>Epistasis, Genetic (genetics)</term><term>Genotype (MeSH)</term><term>Lod Score (MeSH)</term><term>Phenotype (MeSH)</term><term>Phytophthora (pathogenicity)</term><term>Plant Diseases (microbiology)</term><term>Quantitative Trait Loci (genetics)</term><term>Soybeans (genetics)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Cartographie chromosomique (MeSH)</term><term>Croisements génétiques (MeSH)</term><term>Génotype (MeSH)</term><term>Locus de caractère quantitatif (génétique)</term><term>Lod score (MeSH)</term><term>Maladies des plantes (microbiologie)</term><term>Phytophthora (pathogénicité)</term><term>Phénotype (MeSH)</term><term>Résistance à la maladie (génétique)</term><term>Soja (génétique)</term><term>Épistasie (génétique)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Disease Resistance</term><term>Epistasis, Genetic</term><term>Quantitative Trait Loci</term><term>Soybeans</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Locus de caractère quantitatif</term><term>Résistance à la maladie</term><term>Soja</term><term>Épistasie</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="pathogénicité" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Chromosome Mapping</term><term>Crosses, Genetic</term><term>Genotype</term><term>Lod Score</term><term>Phenotype</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Cartographie chromosomique</term><term>Croisements génétiques</term><term>Génotype</term><term>Lod score</term><term>Phénotype</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Phytophthora root and stem rot caused by Phytophthora sojae Kaufmann and Gerdemann is one of the most severe soybean [Glycine max (L.) Merr] diseases in the USA. Partial resistance is as effective in managing this disease as single-gene (Rps gene)-mediated resistance and is more durable. The objective of this study was to identify quantitative trait loci (QTL) associated with partial resistance to P. sojae in PI 398841, which originated from South Korea. A population of 305 F7:8 recombinant inbred lines derived from a cross of OX20-8 × PI 398841 was used to evaluate partial resistance against P. sojae isolate C2S1 using a tray test. Composite interval mapping using a genome-wide logarithm of odd (LOD) threshold detected three QTL on chromosomes 1, 13, and 18, which individually explained 4-16 % of the phenotypic variance. Seven additional QTL, accounting for 2-3 % of phenotypic variance each, were identified using chromosome-wide LOD thresholds. Seven of the ten QTL for resistance to P. sojae were contributed by PI 398841. Seven QTL co-localized with known Rps genes and previously reported QTL for soil-borne root pathogens, isoflavone, and seed oil. Three QTL on chromosomes 3, 13, and 18 co-localized with known Rps genes, but PI 398841 did not exhibit an Rps gene-mediated resistance response following inoculation with 48 different isolates of P. sojae. PI 398841 is potentially a source of novel genes for improving soybean cultivars for partial resistance to P. sojae.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23354974</PMID><DateCompleted><Year>2013</Year><Month>09</Month><Day>03</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1432-2242</ISSN><JournalIssue CitedMedium="Internet"><Volume>126</Volume><Issue>4</Issue><PubDate><Year>2013</Year><Month>Apr</Month></PubDate></JournalIssue><Title>TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</Title><ISOAbbreviation>Theor Appl Genet</ISOAbbreviation></Journal><ArticleTitle>Novel quantitative trait loci for partial resistance to Phytophthora sojae in soybean PI 398841.</ArticleTitle><Pagination><MedlinePgn>1121-32</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s00122-013-2040-x</ELocationID><Abstract><AbstractText>Phytophthora root and stem rot caused by Phytophthora sojae Kaufmann and Gerdemann is one of the most severe soybean [Glycine max (L.) Merr] diseases in the USA. Partial resistance is as effective in managing this disease as single-gene (Rps gene)-mediated resistance and is more durable. The objective of this study was to identify quantitative trait loci (QTL) associated with partial resistance to P. sojae in PI 398841, which originated from South Korea. A population of 305 F7:8 recombinant inbred lines derived from a cross of OX20-8 × PI 398841 was used to evaluate partial resistance against P. sojae isolate C2S1 using a tray test. Composite interval mapping using a genome-wide logarithm of odd (LOD) threshold detected three QTL on chromosomes 1, 13, and 18, which individually explained 4-16 % of the phenotypic variance. Seven additional QTL, accounting for 2-3 % of phenotypic variance each, were identified using chromosome-wide LOD thresholds. Seven of the ten QTL for resistance to P. sojae were contributed by PI 398841. Seven QTL co-localized with known Rps genes and previously reported QTL for soil-borne root pathogens, isoflavone, and seed oil. Three QTL on chromosomes 3, 13, and 18 co-localized with known Rps genes, but PI 398841 did not exhibit an Rps gene-mediated resistance response following inoculation with 48 different isolates of P. sojae. PI 398841 is potentially a source of novel genes for improving soybean cultivars for partial resistance to P. sojae.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Lee</LastName><ForeName>Sungwoo</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Horticulture and Crop Science, The Ohio State University, 1680 Madison Avenue, Wooster, OH 44691, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mian</LastName><ForeName>M A Rouf</ForeName><Initials>MA</Initials></Author><Author ValidYN="Y"><LastName>McHale</LastName><ForeName>Leah K</ForeName><Initials>LK</Initials></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Hehe</ForeName><Initials>H</Initials></Author><Author ValidYN="Y"><LastName>Wijeratne</LastName><ForeName>Asela J</ForeName><Initials>AJ</Initials></Author><Author ValidYN="Y"><LastName>Sneller</LastName><ForeName>Clay H</ForeName><Initials>CH</Initials></Author><Author 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Dorrance</name><name sortKey="Mchale, Leah K" sort="Mchale, Leah K" uniqKey="Mchale L" first="Leah K" last="Mchale">Leah K. Mchale</name><name sortKey="Mian, M A Rouf" sort="Mian, M A Rouf" uniqKey="Mian M" first="M A Rouf" last="Mian">M A Rouf Mian</name><name sortKey="Sneller, Clay H" sort="Sneller, Clay H" uniqKey="Sneller C" first="Clay H" last="Sneller">Clay H. Sneller</name><name sortKey="Wang, Hehe" sort="Wang, Hehe" uniqKey="Wang H" first="Hehe" last="Wang">Hehe Wang</name><name sortKey="Wijeratne, Asela J" sort="Wijeratne, Asela J" uniqKey="Wijeratne A" first="Asela J" last="Wijeratne">Asela J. Wijeratne</name></noCountry><country name="États-Unis"><region name="Ohio"><name sortKey="Lee, Sungwoo" sort="Lee, Sungwoo" uniqKey="Lee S" first="Sungwoo" last="Lee">Sungwoo Lee</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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